Single-cell transcriptomics defines heterogeneity of epicardial cells and fibroblasts within the infarcted murine heart

J Hesse, C Owenier, T Lautwein, R Zalfen, JF Weber… - Elife, 2021 - elifesciences.org
J Hesse, C Owenier, T Lautwein, R Zalfen, JF Weber, Z Ding, C Alter, A Lang, M Grandoch…
Elife, 2021elifesciences.org
In the adult heart, the epicardium becomes activated after injury, contributing to cardiac
healing by secretion of paracrine factors. Here, we analyzed by single-cell RNA sequencing
combined with RNA in situ hybridization and lineage tracing of Wilms tumor protein 1-
positive (WT1+) cells, the cellular composition, location, and hierarchy of epicardial stromal
cells (EpiSC) in comparison to activated myocardial fibroblasts/stromal cells in infarcted
mouse hearts. We identified 11 transcriptionally distinct EpiSC populations, which can be …
In the adult heart, the epicardium becomes activated after injury, contributing to cardiac healing by secretion of paracrine factors. Here, we analyzed by single-cell RNA sequencing combined with RNA in situ hybridization and lineage tracing of Wilms tumor protein 1-positive (WT1+) cells, the cellular composition, location, and hierarchy of epicardial stromal cells (EpiSC) in comparison to activated myocardial fibroblasts/stromal cells in infarcted mouse hearts. We identified 11 transcriptionally distinct EpiSC populations, which can be classified into three groups, each containing a cluster of proliferating cells. Two groups expressed cardiac specification markers and sarcomeric proteins suggestive of cardiomyogenic potential. Transcripts of hypoxia-inducible factor (HIF)-1α and HIF-responsive genes were enriched in EpiSC consistent with an epicardial hypoxic niche. Expression of paracrine factors was not limited to WT1+ cells but was a general feature of activated cardiac stromal cells. Our findings provide the cellular framework by which myocardial ischemia may trigger in EpiSC the formation of cardioprotective/regenerative responses.
eLife